The GDC’s latest data release includes two major National Cancer Institute projects: the HIV+ Tumor Molecular Characterization Project (HTMCP) and Cancer Proteomic Tumor Analysis Consortium (CPTAC)
The GDC has released data for over 44,000 cases from the American Association for Cancer Research’s Project Genomics Evidence Neoplasia Information Exchange (AACR Project GENIE, phs001337), includi
Data from the Multiple Myeloma Research Foundation (MMRF) is now available at the GDC.
CPTAC has provided the Genomic Data Commons (GDC) with genomic data from cancer patients with diverse disease types including Uterine Corpus Endometrial Carcinoma (UCEC), Clear Cell Renal Cell Carc
Data from molecular characterization of 574 Diffuse Large B-Cell Lymphoma (DLBCL) biopsy samples is now available in the GDC Data Portal.
The NCI's Genomic Data Commons (GDC) released a new slide image viewing feature in the GDC Data Portal allowing researchers to view, zoom, and pan slide
The Querying and Downloading Data using the GDC Data Portal and the GDC Data Transfer Tool webinar will help introduce users to the GDC tools for downloading and retrieving data from cancer genomic
BAI files are included with the download when using the GDC Data Transfer Tool to download BAM files.
When using the API to download BAM files, BAI files will only be included if the related_files=true parameter is specified together with the BAM UUID, for example:
https://api.gdc.cancer.gov/data/53f4ad60-0777-409c-a34d-ca4442dc9c44?related_files=true
The Navigating the GDC - A Case Study webinar is the first webinar in a series of NCI GDC Webinar.
The file detail page and the metadata files accessible from that page (if available) can be used to determine the difference between files that share the same filename. For example, the files may be associated with different aliquots, or different patients.
