Analyze Data

Analyze Data

The GDC provides user-friendly and interactive Data Analysis, Visualization, and Exploration (DAVE) Tools supporting gene and variant level analysis that allows researchers to:

• Visualize most frequently mutated genes and view most frequent somatic mutations for a project
• Plot all cases for a project in an OncoGrid and visualize the top 50 mutated genes affected by high impact mutations
• Perform a survival analysis for cases with a mutated form of a certain gene and cases without the mutation
• Visualize mutations and their frequency across cases mapped to a graphical visualization of protein-coding regions using an interactive Protein Viewer
• View the cancer distribution as evidenced by the number of cases affected by the mutation across all projects
• Build cohorts and perform gene and variant level analysis on the cohort
• Compare custom gene or case sets by visualizing set similarities and differences