Center Type | Display Name | FTP Display | Available |
---|---|---|---|
CGCC | Expression-Genes | transcriptome | Yes |
CGCC | Expression-Exon | exon | Yes |
CGCC | Expression-miRNA | mirna | Yes |
CGCC | CNV (CN Array) | cna | Yes |
CGCC | DNA Methylation | methylation | Yes |
CGCC | CNV (SNP Array) | snp | Yes |
CGCC | SNP Frequencies | snp | No |
CGCC | SNP Copy Number Results | cna | No |
GSC | Trace-Sample Relationship | tracerel | Yes |
GSC | Somatic Mutations | mutations | Yes |
BCR | Complete Clinical Set | clin | Yes |
BCR | Minimal Clinical Set | clin | Yes |
GSC | Sequencing Trace | seq | No |
BCR | Tissue Slide Images | slide_images | Yes |
GSC | Short-Read Relationship | sr | Yes |
GSC | BAM-file Relationship | bam | Yes |
CGCC | Quantification-miRNA | mirnaseq | Yes |
CGCC | Quantification-miRNA Isoform | mirnaseq | Yes |
CGCC | Annotations | annotations | Yes |
CGCC | miRNA Sequence-Variants | mirnaseq | Yes |
CGCC | Quantification-Junction | rnaseq | Yes |
CGCC | Quantification-Gene | rnaseq | Yes |
CGCC | Quantification-Exon | rnaseq | Yes |
BCR | Reports | reports | Yes |
CGCC | RNASeq | rnaseq | Yes |
CGCC | miRNASeq | mirnaseq | Yes |
CGCC | Expression-Protein | protein_exp | Yes |
CGCC | Raw Sequence | raw_sequence | Yes |
CGCC | Fragment Analysis Results | fragment_analysis | Yes |
CGCC | GCC Reports | gcc_reports | Yes |
CGCC | RNA Sequence-Variants | rnaseq | Yes |
CGCC | RNA Structural-Variants | rnaseq | Yes |
CGCC | RNASeqV2 | rnaseqV2 | Yes |
CGCC | CNV (Low Pass DNASeq) | cna | Yes |
GSC | Protected Mutations | mutations_protected | Yes |
CGCC | Methylation - Bisulfite Sequencing | bisulfiteseq | Yes |
CGCC | TotalRNASeqV2 | totalrnaseqV2 | Yes |
GDAC | analyses | analyses | Yes |
GDAC | stddata | stddata | Yes |
GDAC | Firehose Reports | reports | Yes |