The GDC provides an array of interactive, web-based Analysis Tools for performing in-depth gene- and variant- level analyses. The workflow is cohort-centric, meaning analyses are specific to a researcher's cohort of interest.
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Documentation
Data Analysis Tools
The GDC provides interactive, cohort-centric tools for analyzing genomic and clinical data.
Data Analysis Policy
Policies and guidelines for appropriate use of data, are provided by the GDC whether open- or controlled- access.
Data Harmonization and Generation
The GDC developers best-in-practice pipelines for processing the most common molecular platforms. Variant calling, gene expression analysis, and other pipelines are implemented using software and algorithms selected in consultation with experts in the genomics community.
What’s New with GDC and Cancer Research
Cancer Research Highlights and Publications:
Why is the mutation frequency value higher (more mutations) in the OncoGrid than the # of Mutations listed on other pages for the same gene?
Mutation frequency in the context of the OncoGrid represents total mutation occurrences in the gene (total count), while the # of Mutations listed on other portions of the GDC Portal represents the number of unique mutations on a gene or within a particular cohort.
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